You should probably set up logging for your Python code, for any important information you need to keep track of. But, when you need to do a little bit of …

Imagine you're a biologist, geneticist, vet, or clinician. You've gone through the painstaking process of extracting some genetic material from a set of samples and sent them off for next …

Python dependency management has improved over the years, but you can still run into issues, particularly when using machine learning libraries like Torch or TensorFlow that have compiled or non-Python …

As part of my continuing quest to make my terminal more colourful, I've starting using Starship. Starship gives you a colourful, customisable prompt, with lots of useful information about your …

Since the death of Cloudstor (RIP), we've had to rely on OneDrive to share data with external collaborators who cannot gain access to USyd supported compute platforms. When working with …

It can be a bit clunky to create a class in Python to store data, as you need to define an __init__ method and write some repetitive code to assign …

When software crashes, it usually produces a runtime error and wil give you a hint to why it is failing. Digging into the libraries and system calls and monitoring "where …

To gauge how many github repos have a "github pages" within a particular an organisation, you can run: gh api -H "Accept: application/vnd.github+json" /orgs/Sydney-Informatics-Hub/repos --jq …

See Trunk in action in the eeharvest package repository Use Trunk to check and monitor code prior to pushing it to production, allowing you to catch issues quickly. It works …

Tox is a great too that standardises package building, testing, linting and CI-integration for Python projects. As not everyone builds Python packages, this article will focus on automatic unit tests …